| St John The Baptist School | 4.8 |
Regular elementary or secondary | Pre-KG-6 | 214 | 12.7 | Baptist |
| St Peter Catholic School | 7.9 |
Regular elementary or secondary | KG-5 | 21 | 6.0 | Roman Catholic |
| Westside Christian School | 9.0 |
Regular elementary or secondary | Pre-KG-8 | 89 | 12.5 | Wisconsin Evangelical Lutheran Synod |
| Peace Thru Christ Lutheran School | 9.9 |
Regular elementary or secondary | 2-8 | 6 | 4.6 | Other Lutheran |
| St Francis Xavier School | 11.3 |
Regular elementary or secondary | Pre-KG-8 | 174 | 12.1 | Roman Catholic |
| St Aloysius School | 11.5 |
Regular elementary or secondary | Pre-KG-5 | 72 | 8.7 | Roman Catholic |
| Walbridge School | 12.0 |
Special education | 1-7 | 24 | 5.2 | Nonsectarian |
| High Point Christian School | 12.1 |
Regular elementary or secondary | Pre-KG-8 | 214 | 14.0 | Christian (no specific denomination) |
| Eastside Lutheran School | 12.8 |
Regular elementary or secondary | Pre-KG-8 | 85 | 13.3 | Wisconsin Evangelical Lutheran Synod |
| Holy Cross Lutheran School | 13.0 |
Regular elementary or secondary | Pre-KG-8 | 91 | 9.7 | Other Lutheran |
| Blessed Sacrament School | 13.3 |
Regular elementary or secondary | Pre-KG-8 | 311 | 16.3 | Roman Catholic |
| Our Lady Queen Of Peace School | 13.5 |
Regular elementary or secondary | KG-8 | 478 | 17.8 | Roman Catholic |
| St James Catholic School | 13.6 |
Regular elementary or secondary | Pre-KG-8 | 170 | 14.9 | Roman Catholic |
| Edgewood Campus School | 13.9 |
Regular elementary or secondary | Pre-KG-8 | 288 | 13.7 | Roman Catholic |
| Montessori Children's House | 14.0 |
Montessori | Pre-KG-3 | 18 | 7.5 | Nonsectarian |
| St Dennis School | 14.4 |
Regular elementary or secondary | KG-8 | 214 | 15.7 | Roman Catholic |
| Our Redeemer Evang Lutheran School | 14.9 |
Regular elementary or secondary | Pre-KG-8 | 105 | 17.5 | Wisconsin Evangelical Lutheran Synod |
| St Maria Goretti Elementary School | 15.0 |
Regular elementary or secondary | Pre-KG-8 | 393 | 16.2 | Roman Catholic |
| Kids Express Learning Center | 15.1 |
Early childhood program/child care center | Pre-KG-KG | 15 | 15.0 | Nonsectarian |
| Peace Lutheran School & Pre-k | 15.1 |
Regular elementary or secondary | Pre-KG-8 | 83 | 16.6 | Wisconsin Evangelical Lutheran Synod |
| Madison Central Montessori | 15.1 |
Montessori | Pre-KG-8 | 89 | 7.7 | Nonsectarian |
| Sacred Hearts School | 15.3 |
Regular elementary or secondary | Pre-KG-8 | 414 | 19.4 | Roman Catholic |
| Immaculate Heart Of Mary School | 15.4 |
Regular elementary or secondary | Pre-KG-8 | 117 | 9.4 | Roman Catholic |
| Madinah Academy Of Madison | 15.9 |
Alternative/other | Pre-KG-3 | 13 | 1.9 | Islamic |
| Three Angels Christian School | 16.7 |
Regular elementary or secondary | Pre-KG-8 | 21 | 7.0 | Latter Day Saints |
| Capitoland Christian School | 16.8 |
Regular elementary or secondary | Pre-KG-4 | 11 | 5.5 | Christian (no specific denomination) |
| Eagle School | 17.0 |
Special program emphasis | KG-8 | 181 | 9.9 | Nonsectarian |
| St Joseph Catholic School | 19.3 |
Regular elementary or secondary | Pre-KG-5 | 87 | 10.5 | Roman Catholic |
| St John's Lutheran School | 19.3 |
Regular elementary or secondary | Pre-KG-8 | 190 | 17.9 | Wisconsin Evangelical Lutheran Synod |
| St Mary School | 20.1 |
Regular elementary or secondary | Pre-KG-8 | 123 | 9.9 | Roman Catholic |
| St Johns Lutheran School | 20.4 |
Regular elementary or secondary | Pre-KG-8 | 101 | 11.3 | Lutheran Church - Missouri Synod |
| St John's Lutheran School | 22.1 |
Regular elementary or secondary | Pre-KG-8 | 37 | 10.3 | Wisconsin Evangelical Lutheran Synod |
| Petersen Elementary School | 23.9 |
Regular elementary or secondary | 2-8 | 17 | 8.5 | Seventh-Day Adventist |
| Zion Ev Lutheran School | 24.4 |
Regular elementary or secondary | Pre-KG-8 | 63 | 9.8 | Wisconsin Evangelical Lutheran Synod |
| St Jerome School | 24.8 |
Regular elementary or secondary | Pre-KG-8 | 144 | 12.5 | Roman Catholic |
